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USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database


USC-OGP 2-DE database 
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Searching in 'USC-OGP 2-DE database' for entry matching: Q15365




USC-OGP 2-DE database:  Q15365


Q15365


General information about the entry
View entry in simple text format
Entry namePCBP1_HUMAN
Primary accession numberQ15365
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1; AltName: Full=Heterogeneous nuclear ribonucleoprotein E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding protein SUB2.3;.
Gene nameName=PCBP1
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

PLATELET_4-7 {PLATELET 4-7}
Homo sapiens (Human)
PLATELET_4-7
  map experimental info
 
PLATELET_4-7

MAP LOCATIONS:
pI=6.35; Mw=40313



PLATELET_6-11 {PLATELET 6-11}
Homo sapiens (Human)
PLATELET_6-11
  map experimental info
 
PLATELET_6-11

MAP LOCATIONS:
pI=6.71; Mw=39701



UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10}
Homo sapiens (Human)
UVEAL_MELANOMA_3-10
  map experimental info
 
UVEAL_MELANOMA_3-10

MAP LOCATIONS:
pI=6.77; Mw=40578
pI=6.47; Mw=40351
pI=6.93; Mw=39899
pI=7.15; Mw=39675

Cross-references
UniProtKB/Swiss-ProtQ15365; PCBP1_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry namePCBP1_HUMAN
Primary accession numberQ15365
Secondary accession number(s) Q13157 Q14975
Sequence was last modified on February 16, 2004 (version 2)
Annotations were last modified on March 15, 2017 (version 174)
Name and origin of the protein
DescriptionRecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1; AltName: Full=Heterogeneous nuclear ribonucleoprotein E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding protein SUB2.3;
Gene nameName=PCBP1
Encoded onName=PCBP1
Keywords3D-structure; Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; DNA-binding; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Viral RNA replication.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX78137; CAA55016.1; -; mRNA
EMBLU24223; AAA91317.1; -; mRNA
EMBLZ29505; CAA82631.1; ALT_FRAME; mRNA
EMBLBC039742; AAH39742.1; -; mRNA
CCDSCCDS1898.1; -; .
RefSeqNP_006187.2; NM_006196.3; .
UniGeneHs.2853; -; .
PDB1WVN; X-ray; 2.10 A; A=279-356
PDB1ZTG; X-ray; 3.00 A; A/B/C/D=14-85
PDB3VKE; X-ray; 1.77 A; A/B/C/D=14-86
PDBsum1WVN; -; .
PDBsum1ZTG; -; .
PDBsum3VKE; -; .
ProteinModelPortalQ15365; -; .
SMRQ15365; -; .
BioGrid111126; 169; .
DIPDIP-38136N; -; .
IntActQ15365; 88; .
MINTMINT-96267; -; .
STRING9606.ENSP00000305556; -; .
iPTMnetQ15365; -; .
PhosphoSitePlusQ15365; -; .
SwissPalmQ15365; -; .
BioMutaPCBP1; -; .
DMDM42560548; -; .
OGPQ15365; -; .
REPRODUCTION-2DPAGEIPI00016610; -; .
UCD-2DPAGEQ15365; -; .
EPDQ15365; -; .
PaxDbQ15365; -; .
PeptideAtlasQ15365; -; .
PRIDEQ15365; -; .
DNASU5093; -; .
EnsemblENST00000303577; ENSP00000305556; ENSG00000169564; .
GeneID5093; -; .
KEGGhsa:5093; -; .
CTD5093; -; .
DisGeNET5093; -; .
GeneCardsPCBP1; -; .
HGNCHGNC:8647; PCBP1; .
HPACAB037113; -; .
HPAHPA043803; -; .
HPAHPA068497; -; .
MIM601209; gene; .
neXtProtNX_Q15365; -; .
OpenTargetsENSG00000169564; -; .
PharmGKBPA32986; -; .
eggNOGKOG2190; Eukaryota; .
eggNOGENOG410XNN8; LUCA; .
GeneTreeENSGT00760000119144; -; .
HOGENOMHOG000182823; -; .
HOVERGENHBG053520; -; .
InParanoidQ15365; -; .
KOK12889; -; .
OMATIAGMPQ; -; .
OrthoDBEOG091G0DHI; -; .
PhylomeDBQ15365; -; .
TreeFamTF318292; -; .
ReactomeR-HSA-72163; mRNA Splicing - Major Pathway; .
ReactomeR-HSA-72203; Processing of Capped Intron-Containing Pre-mRNA; .
ChiTaRSPCBP1; human; .
EvolutionaryTraceQ15365; -; .
GeneWikiPCBP1; -; .
GenomeRNAi5093; -; .
PROPR:Q15365; -; .
ProteomesUP000005640; Chromosome 2; .
BgeeENSG00000169564; -; .
CleanExHS_PCBP1; -; .
ExpressionAtlasQ15365; baseline and differential; .
GenevisibleQ15365; HS; .
GOGO:0005737; C:cytoplasm; IDA:BHF-UCL; .
GOGO:0005829; C:cytosol; IDA:HPA; .
GOGO:0070062; C:extracellular exosome; IDA:UniProtKB; .
GOGO:0016020; C:membrane; IDA:UniProtKB; .
GOGO:0016607; C:nuclear speck; IDA:HPA; .
GOGO:0005654; C:nucleoplasm; IDA:HPA; .
GOGO:0000932; C:P-body; IDA:HPA; .
GOGO:0045296; F:cadherin binding; IDA:BHF-UCL; .
GOGO:0003729; F:mRNA binding; IDA:BHF-UCL; .
GOGO:0003723; F:RNA binding; IDA:UniProtKB; .
GOGO:0000981; F:RNA polymerase II transcription factor activity; sequence-specific DNA binding; IEA:Ensembl
GOGO:0098847; F:sequence-specific single stranded DNA binding; IEA:Ensembl; .
GOGO:0003697; F:single-stranded DNA binding; IDA:UniProtKB; .
GOGO:0010467; P:gene expression; TAS:Reactome; .
GOGO:0000398; P:mRNA splicing; via spliceosome; TAS:Reactome
GOGO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl; .
GOGO:0039694; P:viral RNA genome replication; IDA:UniProtKB; .
Gene3D3.30.1370.10; -; 3; .
InterProIPR004087; KH_dom; .
InterProIPR004088; KH_dom_type_1; .
PfamPF00013; KH_1; 3; .
SMARTSM00322; KH; 3; .
SUPFAMSSF54791; SSF54791; 3; .
PROSITEPS50084; KH_TYPE_1; 3; .



USC-OGP 2-DE database image


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Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

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